Matrix is about knowing yourself and extending beyond.
When I saw 'The Matrix', I was actually thrilled with the way Wachowski brothers pictured Neo's exploration about his strengths. In a broader sense it had very good theme in it. It relates to everyone's life trying to prove themselves. Unfortunately most of them couldnt achieve what they are aiming for since they don't know their strengths. Reaching your own-self and understanding it is more important in setting up a goal. Then the journey never become painful rather enjoyable.
Coming back to our relation with the matrix concept, may sound strange but its a fact, when Neo gets into the matrix he tries to learn to be in a different time dimension. Then he starts controling everything around him. When we examine our self doing things that we like the most, we will be in a state where our brain would be more relaxed and focused on what we are doing. We then get utmost results in it. This state is like we are in matrix while doing it.
Bullet Dodging was the best stunt at the end. It shows Neo's improvisation of his strength and becoming more confident on himself. This is possible when we have confidense in the work we do and proper assesment of our own caliber in doing it.